PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr016067.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family GRAS
Protein Properties Length: 106aa    MW: 11494.2 Da    PI: 6.9164
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr016067.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS291.3e-094895200251
         GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse 251
                    ++Vn+v++lh+ll +++ +e     vL +vk+++ ++v+vveqea+hn++
  Pbr016067.1  48 RPMVVNSVFELHKLLGRPGVIEY----VLLVVKQMKLEIVTVVEQEANHNGA 95 
                  5689***********99999999....**********************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035144.3E-74895IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    Send to blast
MACAEAVQLN NFNLAKALVT QIGYLVESTH SRRSTTHSPT CCRCTSRRPM VVNSVFELHK  60
LLGRPGVIEY VLLVVKQMKL EIVTVVEQEA NHNGAAADEG LDVGD*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008372912.12e-18PREDICTED: DELLA protein GAIP-like
RefseqXP_010101954.11e-16hypothetical protein L484_011971
SwissprotQ9SLH38e-16RGA_ARATH; DELLA protein RGA
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3857422
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.11e-16GRAS family protein